Tumour mutational burden as a predictive and prognostic biomarker in locally advanced and recurrent/metastatic adenoid cystic carcinoma.

Authors

null

Karan Patel

The Christie Hospital NHS Foundation Trust, Manchester, United Kingdom, Manchester, United Kingdom

Karan Patel , Samuel Rack , Hitesh Mistry , Emily Heathcote , Guy Betts , Kevin Joseph Harrington , Robert Metcalf

Organizations

The Christie Hospital NHS Foundation Trust, Manchester, United Kingdom, Manchester, United Kingdom, The Christie NHS Foundation Trust, Manchester, United Kingdom, The University of Manchester, Manchester, United Kingdom, The Christie Hospital NHS Foundation Trust, Manchester, United Kingdom, Manchester University NHS Foundation Trust, Manchester, United Kingdom, The Royal Marsden/The Institute of Cancer Research NIHR Biomedical Research Centre, London, United Kingdom

Research Funding

Other Foundation
The Christie NHS Foundation Trust Charity, Syncona Foundation, The Infrastructure Industry Foundation

Background: Adenoid cystic carcinoma (ACC) is a heterogenous disease with limited therapeutic drug options. Identifying effective therapies and defining aggressive subtypes that might benefit from earlier intervention over surveillance remains clinically pertinent. NOTCH pathway-activated ACC is associated with worse outcomes. Pembrolizumab is approved by the FDA for tumour mutational burden-high (TMB-H) [≥10 mutations/megabase (mut/Mb)] solid tumour using the FoundationOne CDx (F1CDx) assay. We describe the distribution of TMB and characterise its relationship with NOTCH gain-of-function (GoF) mutation and survival in 2 cohorts with locally advanced (LA) or recurrent/metastatic (R/M) ACC. Methods: 124 tumours from the UK NHS (NHS group) and 139 tumours from cBioPortal; MSK metTropism (MSK group) were evaluated as independent cohorts. TMB (mut/Mb) of FFPE tumour DNA was calculated either by F1CDx or its precursor FoundationOne NGS in the NHS group, or MSK-IMPACT NGS in the MSK group. NOTCH1/2 mutations were classed as GoF if predicted to disrupt the NRR/PEST domains. Overall survival (OS) was measured from diagnosis of unresectable LA-R/M ACC. P-values were computed using two-tailed Mann-Whitney U and log-rank tests. Results: Median age at diagnosis of LA-R/M ACC was 58.2 yrs in the NHS group and 53.7 yrs in the MSK group. 69/124 (56%) tumours in the NHS group and 69/139 (50%) in the MSK group were from female patients. In patients in whom the site of biopsy was known, 47/95 (50%) tumour samples in the NHS group and 100/139 (72%) in the MSK group were from metastases. Median TMB was lower in the NHS group than the MSK group (1.26 [IQR 0 – 2.52] vs 1.96 [IQR 0.87 – 3.46] mut/Mb, p = 0.007). TMB was ≥10 mut/Mb in 1/124 (0.8%) in the NHS group and 0/139 in the MSK group. NOTCH1/2 GoF mutation was seen in 16/124 (13%) in the NHS group and 22/139 (16%) in the MSK group. Median TMB for tumours with NOTCH1/2 GoF mutation was 2.52 mut/Mb (IQR 1.82 – 3.84) in the NHS group compared with 4.38 mut/Mb (IQR 3.33 – 4.89) in the MSK group (p = 0.03). For tumours with NOTCH1/2 GoF mutation in the NHS group, median OS reduced with TMB > median of 2.52 mut/Mb (0.7 v 2.6 yrs, p = 0.02). For the MSK subgroup with NOTCH1/2 GoF mutation, median OS was 1.6 yrs with TMB > median of 4.38 mut/Mb but 2.4 yrs with TMB less than this (p = 0.7). Conclusions: LA-R/M ACC has a low TMB profile overall; only 1 TMB-H tumour was detected using F1CDx or FoundationOne NGS, underlining the lack of efficacy of immunotherapy seen in ACC. Median TMB was higher in NOTCH-activated ACC in both the NHS and MSK groups. Differences in inter-group biology, site of disease biopsied and assay type may account for the variation in TMB between the 2 groups. Higher TMB significantly correlated with reduced survival in tumours with NOTCH1/2 GoF mutation in the NHS group. TMB may have value in further stratifying patients with LA-R/M ACC to guide initiation of drug therapies.

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Abstract Details

Meeting

2023 ASCO Annual Meeting

Session Type

Publication Only

Session Title

Publication Only: Head and Neck Cancer

Track

Head and Neck Cancer

Sub Track

Other Head and Neck Cancer (Salivary, Thyroid)

Citation

J Clin Oncol 41, 2023 (suppl 16; abstr e18086)

DOI

10.1200/JCO.2023.41.16_suppl.e18086

Abstract #

e18086

Abstract Disclosures