Circulating tumor DNA (ctDNA) kinetics in colorectal cancer (CRC) treated with curative intent in the VICTORI study with an ultrasensitive MRD assay.

Authors

Joao Paulo Solar Vasconcelos

Joao Paulo Solar Vasconcelos

BC Cancer - Vancouver, University of British Columbia, Vancouver, BC, Canada

Joao Paulo Solar Vasconcelos , Emma Titmuss , Fabio Navarro , Charles Abbott , Brendan Chia , James T. Topham , Gale Ladua , Tharani Krishnan , Daniela Hegebarth , Howard J Lim , Karamjit Gill , Sharlene Gill , Carl J. Brown , Amandeep (Anu) Ghuman , Adam Meneghetti , Daniel John Renouf , David F. Schaeffer , Richard Chen , Sean Michael Boyle , Jonathan M. Loree

Organizations

BC Cancer - Vancouver, University of British Columbia, Vancouver, BC, Canada, Genome Sciences Centre, BCCA, Vancouver, BC, Canada, Personalis, Inc., Menlo Park, CA, BCCA, Vancouver Cancer Centre, Vancouver, BC, Canada, Pancreas Centre BC, Vancouver, BC, Canada, BC CANCER - Vancouver Cancer Centre, Vancouver, BC, Canada, BC Cancer - Vancouver Cancer Centre, Vancouver, BC, Canada, BC Cancer - Vancouver, Vancouver, BC, Canada, Providence Health - St. Paul's Hospital, Vancouver, BC, Canada, Providence Health - St. Paul’s Hospital, Vancouver, BC, Canada, Vancouver General Hospital, Vancouver, BC, Canada, BC Cancer, Vancouver, BC, Canada, Department of Pathology & Laboratory Medicine Vancouver General Hospital, Vancouver, BC, Canada

Research Funding

No funding sources reported

Background: Detection of molecular residual disease (MRD) with ctDNA is highly prognostic for recurrence in CRC. However, many cancers still recur without detectable ctDNA and increased lead time before clinical recurrence may create a window of opportunity to intervene. Here we apply an ultra-sensitive assay, NeXT Personal, to profile patients in the VICTORI study, a prospective cohort of patients with CRC managed with curative-intent treatment. Methods: To date, the first 33 patients with CRC have undergone panel creation. NeXT Personal was employed to construct personalized liquid biopsy panels for each patient with up to ~1,800 single nucleotide variants (SNV) identified via whole-genome sequencing. For each patient, plasma is collected before curative intervention (baseline), every 2 weeks for 2 months (MRD window), and every 3 months for up to 3 years (surveillance). VICTORI will enroll > 175 patients and include a health economics analysis. Results: Of 33 patients enrolled to date, 25 (76%) are stage I-III and 8 are stage IV treated with curative interventions. 18 colon cancers and 15 rectal cancers are included. Pre-operative baseline sensitivity was 90.6% (29/32; 1 patient excluded as pCR at the time of baseline blood draw). Of the MRD- patients at baseline, 2 had prior neoadjuvant treatment and 1 was stage 1. Preliminary results (median 7.2 month follow-up; 5 recurrences) show 80% (4/5) of recurrences are MRD+ at the 4-week landmark and 50% (2/4; 1 missing sample) were MRD+ at the 2-week landmark. In 75% (3/4) stage II-III recurrences, the first MRD+ detection was in the ultra-low range of < 100 PPM ( < 0.01% tumor fraction). MRD detection at week 4 and 8 trended towards poorer recurrence-free survival (RFS) with similar separation of patients (log rank p = 0.062 and p = 0.011, respectively). Conclusions: Preliminary results from our prospective study demonstrate strong rates of ctDNA detection at week 4 landmark analysis, potentially due to detection of very low levels of ctDNA with an ultra-sensitive MRD assay. The majority of the first detections for MRD were in the ultra-low ctDNA range, indicating the importance of high sensitivity MRD testing.

ctDNA and cfDNA detection rate at baseline and MRD window.

Time PointNeXT Personal Positivity Rate
% (n)
Positivity Rate Excluding Ultra-low Detections Below 100PPM
% (n)
Median MRD Variant Level, All (PPM)Median MRD Variant Level, MRD+ (PPM)
Baseline90.6 (29/32)62.5 (20/32)305.0394.0
Week 222.2 (6/27)11.1 (3/27)0.5558.0
Week 438.5 (10/26)15.4 (4/26)0.4232.5
Week 635.7 (10/28)14.3 (4/28)0.6724.4
Week 841.4 (12/29)20.7 (6/29)1.1150.3

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Abstract Details

Meeting

2024 ASCO Annual Meeting

Session Type

Publication Only

Session Title

Publication Only: Gastrointestinal Cancer—Colorectal and Anal

Track

Gastrointestinal Cancer—Colorectal and Anal

Sub Track

Colorectal Cancer–Local-Regional Disease

Citation

J Clin Oncol 42, 2024 (suppl 16; abstr e15625)

DOI

10.1200/JCO.2024.42.16_suppl.e15625

Abstract #

e15625

Abstract Disclosures