Genomic landscape and therapeutic implications in advanced solid cancers: KOSMOS-II (KOrean Precision Medicine Networking Group Study of MOlecular profiling guided therapy based on genomic alterations in advanced Solid tumors, KCSG AL-22-09).

Authors

null

Heejung Chae

Department of Internal Medicine, National Cancer Center, Goyang, South Korea

Heejung Chae , Harim Koo , Sun Young Kim , Sook Ryun Park , Shinkyo Yoon , Min-Hee Ryu , Soohyeon Lee , Tae-Yong Kim , Tae Min Kim , Sae-Won Han , Se-Hoon Lee , Hyun Ae Jung , Hye Ryun Kim , Minkyu Jung , Gyeong-Won Lee , Mi Sun Ahn , Hongseok Yun , Yoon-La Choi , Sejoon Lee , Jee Hyun Kim

Organizations

Department of Internal Medicine, National Cancer Center, Goyang, South Korea, Department of Cancer Biomedical Science, Graduate School of Cancer Science and Policy, Goyang, South Korea, Department of Oncology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, South Korea, Department of Internal Medicine, Korea University College of Medicine, Korea University Anam Hospital, Seoul, Korea, Republic of (South), Department of Internal Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul, South Korea, Division of Hematology-Oncology, Department of Medicine, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, South Korea, Division of Medical Oncology, Department of Internal Medicine, Yonsei Cancer Center, Yonsei University College of Medicine, Seoul, Korea, Republic of (South), Division of Medical Oncology, Department of Internal Medicine, Yonsei Cancer Center, Yonsei University College of Medicine, Seoul, South Korea, Department of Internal Medicine, Gyeongsang National University College of Medicine, Jinju, South Korea, Department of Hematology-Oncology, Ajou University School of Medicine, Suwon, South Korea, Department of Genomic Medicine, Seoul National University Hospital, Seoul, South Korea, Department of Pathology and Translational genomics, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, South Korea, Center for Precision Medicine, Seoul National University Bundang Hospital, Seongnam, South Korea, Department of Internal Medicine, Seoul National University College of Medicine, Seoul National University Bundang Hospital, Seongnam, Korea, Republic of (South)

Research Funding

Ministry of Health and Welfare, Republic of Korea
KOSMOS - Industry Consortium: Roche (Basel, Switzerland) and Lunit (Seoul, Republic of Korea)

Background: Despite advances in genomic diagnosis and therapeutics, providing precision medicine remains a challenge in the real-world practical application, especially in nations with diverse next-generation sequencing (NGS) cancer panels and a shortage of available targeted agents due to lack of approval or reimbursement. Methods: The KOSMOS-II is an ongoing prospective, nationwide, master observational study with multiple cohorts undergoing molecular-guided treatment (MGT) recommended by a central molecular tumor board based on local NGS cancer panel results for advanced cancer patients (pts) (J Clin Oncol 2023;41:16 suppl TPS 1608). Key genomic features were integrated with clinical data to construct a Clinico-Genomic Database (CGDB). To minimize inter-panel variations, all variant calling format (VCF) data on single nucleotide variants, insertions, and deletions were normalized by lifting over to the same reference genome (hg19). Re-annotation was performed using a consistent pipeline incorporating public databases. This preliminary analysis outlines the genomic landscapes and therapeutic implications in the first half of enrolled patients out of a targeted accrual of 1,000. Results: From September 2022 to December 2023, 489 pts were enrolled with a median age of 60 years (19 - 87), male 56.9%, and a median of 4 lines (1-15) of prior systemic therapy. The most common primary cancer sites were colorectum (n = 96, 19.6%), biliary tract (n = 63, 12.9%), and breast (n=40, 8.2%). CGDB was constructed for 360 pts, employing 20 different panels from 31 participating centers. The most common genomic alterations were TP53 mutation (Mut) (n=183, 50.8%), APC Mut (n=124, 34.4%), and ERBB2 amplification (AMP) (n=90, 25%). MGT was assigned to 59.5% of pts, 45.2% were allocated to investigational drugs targeting genetic alterations approved for other indications (Tier 1), and 12.6 % to clinical trials matching their genetic alterations (Tier 3). The concordance rate between pre-submitted physician choices and the MTB recommendation was 54.6% (Tier 1, 55%; Tier 2 (alternative treatments including palliative care), 46%; Tier 3, 86%). ERBB2 alterations were most frequently led to MGT; trastuzumab emtansine (n = 75, 20.8%; ERBB2 AMP n=36; ERBB2 Mut n=20; ERBB2 AMP & Mut n=17; NA n=2), or trastuzumab plus pertuzumab (n = 17, 7.5%), followed by EGFR gain to bevacizumab plus erlotinib (n = 18, 5%) and high TMB (≥20 mut/Mb) to atezolizumab (n= 46, 12.8%). Response evaluation of Tier 1 treatment was available in 158 patients, with a 16-week clinical benefit rate of 34.8%. Conclusions: The KOSMOS-II study demonstrated the feasibility of a pragmatic, nationwide precision medicine approach using diverse real-world NGS panels and favorable clinical outcomes.

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Abstract Details

Meeting

2024 ASCO Annual Meeting

Session Type

Poster Session

Session Title

Quality Care/Health Services Research

Track

Care Delivery and Quality Care

Sub Track

Real-World Data/Outcomes

Citation

J Clin Oncol 42, 2024 (suppl 16; abstr 11161)

DOI

10.1200/JCO.2024.42.16_suppl.11161

Abstract #

11161

Poster Bd #

356

Abstract Disclosures

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