Characterization of genomic landscape using comprehensive circulating cell-free tumor DNA next generation sequencing in advanced thyroid carcinoma.

Authors

null

Valentina Tarasova

Department of Head and Neck-Endocrine Oncology, Moffitt Cancer Center, Tampa, FL

Valentina Tarasova , Jill Tsai , Bryan McIver , Julie E. Hallanger-Johnson , Colleen Veloski , Sarimar Agosto Salgado , Jude Masannat , Leylah Drusbosky , Christine H. Chung

Organizations

Department of Head and Neck-Endocrine Oncology, Moffitt Cancer Center, Tampa, FL, Guardant Health, Inc., Redwood City, CA, Moffitt Cancer Center, Tampa, FL

Research Funding

No funding received

Background: Availability of targeted therapies in thyroid carcinoma (TC) has challenged the conventional treatment algorithms and established urgency for timely identification of targetable genetic abnormalities. Tissue-based next generation sequencing (NGS) is often limited by tumor insufficiency and slow turn-around time. Plasma-based circulating tumor DNA (ctDNA) NGS overcomes these barriers and has been widely adopted across advanced-stage solid tumors. To date, plasma-based NGS characterization of genomic alterations in TC has not been determined. Herein, we profile potential actionable mutations detected via ctDNA in patients with advanced TC subtypes. Methods: A retrospective analysis of Guardant Health, Inc database was performed using the commercially available Guardant360 plasma-NGS test on advanced metastatic TC samples collected between 2016 and 2021. Patients with papillary TC (PTC), follicular TC (FTC), poorly differentiated TC (PDTC), medullary TC (MTC), and anaplastic TC (ATC) were clustered into four groups (G1: ATC, G2: PTC, FTC, and PDTC, G3: MTC, and G4: unspecified TC). The landscape of genetic alterations, frequencies of alterations in clinically relevant genes, and tumor mutation burden (TMB) were analyzed. Results: Of the 1,108 patients included, 47.1% were male. The median age was 65 years old (range 13-98), and 0.18% (n = 5) patients were under 18 years old. Alteration frequencies of selected, clinically relevant genes are demonstrated in the table below. TMB analysis was performed on 315 samples, and the mean TMB was higher in G1 compared to G2, G3, and G4 (p= 0.0029, 0.0826, and 0.0112, respectively). Conclusions: Plasma-based comprehensive NGS by Guardant360 may be utilized in patients with advanced metastatic TC for detecting clinically relevant genetic alterations for the selection of available targeted therapies, immunotherapy, or determination of the clinical trial eligibility. Future validation of the clinical utility by analysis of paired tumor and plasma samples is warranted.


Group 1

ATC

n = 93
Group 2

PTC, FTC, PDTC

n = 99
Group 3

MTC

n = 34
Group 4

Unspecified TC

n = 882
Total n = 1108
BRAF
28.0%
17.2%
5.9%
15.3%
16.2%
RAS (HRAS/KRAS/NRAS)
16.1%
15.2%
2.9%
15.6%
15.3%
RET mutations
2.2%
0
38.2%
4.3%
4.8%
RET fusions
1.1%
0
0
0.9%
0.8%
ALK fusions
0
0
2.9%
0.3%
0.4%
NTRK fusions
0
0
0
0.2%
0.2%
PTEN
7.5%
2.0%
0
4.3%
4.2%
TERT
18.3%
14.1%
0
11.0%
11.5%
TP53
58.1%
29.3%
8.8%
34.9%
35.3%

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Abstract Details

Meeting

2022 ASCO Annual Meeting

Session Type

Poster Session

Session Title

Developmental Therapeutics—Molecularly Targeted Agents and Tumor Biology

Track

Developmental Therapeutics—Molecularly Targeted Agents and Tumor Biology

Sub Track

Circulating Biomarkers

Citation

J Clin Oncol 40, 2022 (suppl 16; abstr 3045)

DOI

10.1200/JCO.2022.40.16_suppl.3045

Abstract #

3045

Poster Bd #

37

Abstract Disclosures