Expression of end-binding protein 1 (EB1), a potential response-predictive biomarker for lisavanbulin, in glioblastoma and various other solid tumor types.

Authors

null

Magdalena Skowronska

Institute of Pathology, University of Bern, Bern, Switzerland

Magdalena Skowronska , Crescens Diane Tiu , Alexandar Tzankov , Fatima König , Joanne Lewis , Igor Vivanco , Malte Kleinschmidt , Kirk Beebe , Stephanie Anderson , Felix Bachmann , Marc Engelhardt , Heidi A Lane , Thomas Kaindl , Alexandru C Stan , Elizabeth Ruth Plummer , T.R. Jeffry Evans , Inti Zlobec , Juanita Suzanne Lopez

Organizations

Institute of Pathology, University of Bern, Bern, Switzerland, The Royal Marsden NHS Foundation Trust, Sutton, United Kingdom, Institute of Pathology, University Hospital Basel, Basel, Switzerland, Targos Molecular Pathology GmbH, Kassel, Germany, Northern Centre for Cancer Care, Freeman Hospital, Newcastle upon Tyne, United Kingdom, Division of Cancer Therapeutics, The Institute of Cancer Research, Sutton, United Kingdom, GeneCentric Therapeutics Inc., Durham, NC, Basilea Pharmaceutica International Ltd., Basel, Switzerland, Basilea Pharmaceutica International Ltd., Basel, NJ, Switzerland, Department of Pathology, Neuropathology, The Queen Elizabeth University Hospital, The Royal Hospital for Children, NHS GGC, Glasgow, United Kingdom, University of Glasgow, Beatson West of Scotland Cancer Center, Glasgow, United Kingdom, Drug Development Unit -The Institute of Cancer Research and The Royal Marsden NHS Foundation Trust, Sutton, United Kingdom

Research Funding

Pharmaceutical/Biotech Company
Basilea Pharmaceutica International Ltd

Background: EB1, a protein located on the plus-ends of microtubules is involved in microtubule function and has been associated with glioblastoma (GBM) stem-cell-ness and more aggressive disease. Lisavanbulin (BAL101553) is a prodrug of the lipophilic small molecule BAL27862, that promotes tumor cell death by modulating the spindle assembly checkpoint and has been shown in rodents to efficiently penetrate the brain. Data from GBM mouse models and recent phase 1 clinical data (Lopez et al. ESMO 2020) suggest that EB1 is a response-predictive marker for lisavanbulin in GBM. A phase 2 study is ongoing to confirm this hypothesis (NCT02490800). A proof-of-concept in GBM would support an expansion of EB1-directed lisavanbulin clinical development in non-GBM tumors, which requires prevalence estimates of EB1-positivity in non-GBM tumor types. Methods: Tissue samples from GBM and other tumor types were stained for EB1 using a CE-marked immunohistochemistry Clinical Trial Assay (Targos Molecular Pathology GmbH, Kassel Germany). EB1-positivity was assessed by a board-certified pathologist based on the percentage of tumor cells showing moderate or strong staining for EB1, using thresholds of ≥50%, ≥60% and ≥70% of tumor cells with EB1 positivity. Whole transcriptome sequencing (WTS) using RNAseq was performed in a subset of tissue samples to develop a potential RNA-based predictive response signature for lisavanbulin. Results: 73 GBM tissue samples and 333 tissue samples from 13 other cancer types were stained for EB1. The strongest overall signal for EB1-positivity was obtained for medulloblastoma, neuroblastoma and GBM. In addition, moderate or strong EB1-staining in ≥50% of tumor cells was observed in samples from colorectal cancer (CRC), non small-cell lung cancer (NSCLC), metastatic melanoma, small-cell lung cancer (SCLC) and triple-negative breast cancer (TNBC). An expanded staining campaign is ongoing in these cancer types. Initial results from the ongoing WTS analyses show marked differences in gene expression profiles between EB1-positive and -negative cases. Conclusions: Strong EB1-positivity is infrequent but occurs in a variety of tumor types, with the strongest signals in medulloblastoma, neuroblastoma and GBM. A phase 2 study is ongoing to assess prospectively whether EB1 is a response-predictive biomarker for lisavanbulin in GBM.

Tumor type
N
tissue samples
% EB1-positive tissue samples (moderate or strong EB1 staining based on% tumor cells threshold)
≥50%≥60%≥70%Max
Medulloblastoma
7
14%
14%
14%
100%
Neuroblastoma
13
23%
23%
15%
90%
GBM
73
11%
11%
7%
80%
NSCLC
30
10%
7%
0%
60%
CRC
30
7%
7%
0%
60%
Metastatic melanoma
30
3%
3%
0%
60%
SCLC
13
8%
0%
0%
50%
TNBC
30
3%
0%
0%
50%
Gynecological carcinosarcoma;
Hepatocellular carcinoma;
Breast cancer (not TNBC);
Prostate cancer; Soft tissue sarcoma;
Renal cell carcinoma
30 per tumor type
0%
0%
0%
<50%

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Abstract Details

Meeting

2021 ASCO Annual Meeting

Session Type

Poster Session

Session Title

Developmental Therapeutics—Molecularly Targeted Agents and Tumor Biology

Track

Developmental Therapeutics—Molecularly Targeted Agents and Tumor Biology

Sub Track

Tissue-Based Biomarkers

Citation

J Clin Oncol 39, 2021 (suppl 15; abstr 3118)

DOI

10.1200/JCO.2021.39.15_suppl.3118

Abstract #

3118

Poster Bd #

Online Only

Abstract Disclosures

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