Development and clinical validation of a blood test for early detection of colorectal adenomas and cancer.

Authors

null

Shai Friedland

Stanford University Medical Center Gastroenterology and Hepatology, Stanford, CA

Shai Friedland , Jennifer Y. Pan , Drew Watson , Yu Chen , Ashish Nimgaonkar , Zulfiqar Gulzar , Pratyush Gupta , Alex Atkins , Jr-Ming Lai , Ben Hsieh , Stephen Su , Iris Ciu , Ploy Setthasap , John Sninsky , Rui Mei

Organizations

Stanford University Medical Center Gastroenterology and Hepatology, Stanford, CA, Stanford University School of Medicine, Palo Alto, CA, Cell Works Group, Inc., South San Francisco, CA, VA Palo Alto Health Care System, Palo Alto, CA, The Johns Hopkins Hospital, Baltimore, MD, CellMax Life, Sunnyvale, CA

Research Funding

Pharmaceutical/Biotech Company
CellMax Life

Background: Many of the 50,000 annual colorectal cancer (CRC) deaths can be attributed to 1/3 eligible Americans not following screening guidelines or approximately 1/2 of the population not adherent to the follow-up post-polypectomy guidelines. The new understanding of the natural history and shared etiology of adenomas and CRC inform integration of clinically relevant biomarkers. The two objectives of CRC screening and surveillance are early detection to improve survival and prevention of CRC through removal of adenomas using colonoscopy. Adenomas account for 98% of actionable colonoscopies. Stool tests have low sensitivity for advanced adenomas (AA, 24-42%). Methods: A prospective, blinded study was conducted at the VA Palo Alto Health Care System. Patients had blood drawn prior to colonoscopy. The test analyzes two biomarkers: circulating gastrointestinal epithelial cells and somatic mutations of cell-free DNA. The probability of advanced neoplasia was obtained by ordinal/nominal logistic regression methods together with SEER-incidence rate and prior history of AA on a training set of 346 subjects. The cutpoint for the quantitative score was fixed and the remaining 112 subjects were tested. Results: Interim results for 458 patients with no prior diagnosis of colorectal cancer (CRC) are presented. The cohort included both screening (239) and surveillance (219) subjects. Indications for colonoscopy were 86% asymptomatic and 14% with symptoms or positive-FIT. Balanced distribution of roughly 3/4th subjects in each disease category were randomly selected for training and algorithm development and the remaining 1/4th subjects were used for validation. A cutpoint was selected to obtain a test specificity (non-neoplastic finding or negative colonoscopy) of 90% resulting in a sensitivity of 100% and 80.0% for detection of CRC and advanced neoplasia (AN = CRC+AA), respectively, on the training subjects. The area under the ROC curve is 0.91. Validation using the fixed cutpoint and 112 test subjects achieved 91.4% specificity and 100% and 75.0% sensitivity for CRC and AN. Conclusions: This blood test has high sensitivity for colorectal advanced neoplasia while retaining high specificity. The quantitative nature of the score has the potential to enable stratification of patients for screening or post-polypectomy surveillance colonoscopy.

Study Results# Subject
Training
# Subject
Validation
Training
N = 346
Validation
N = 112
Screening/Surveillance176/17063/49
Sensitivity (95% CI)
CRC104100%
(72.3-100)
100%
(51.0-100)
AA
Adenomas ≥ 1cm, high grade dysplasia, > = 25% villous
501676.0%
(62.6-85.7)
68.8%
(44.4-85.8)
Nonadv Adenoma1685748.8%
(41.4-56.3)
54.4%
(41.6-66.6)
Advan Neoplasia
(CRC+AA)
602080.0%
(68.2-88.2)
75.0%
(53.1-88.8)
Specificity (95% CI)
All Negative (non-neoplastic finding + negative colonoscopy)1183590.7%
(84.1-94.7)
91.4%
(77.6-97.0)

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Abstract Details

Meeting

2021 Gastrointestinal Cancers Symposium

Session Type

Poster Session

Session Title

Poster Session: Colorectal Cancer

Track

Colorectal Cancer

Sub Track

Prevention, Screening, and Hereditary Cancers

Citation

J Clin Oncol 39, 2021 (suppl 3; abstr 50)

DOI

10.1200/JCO.2021.39.3_suppl.50

Abstract #

50

Poster Bd #

Online Only

Abstract Disclosures