Association of secondary somatic mutations in BRCA1/2 with clinical resistance to PARP inhibitors and chemotherapy.

Authors

null

Lingjun Zhu

The First Affiliated Hospital of Nanjing Medical University, Jiangsu Province, China

Lingjun Zhu , Yan Zhang , Pingping Dai , Ping Zhou , Hui Li , Chunwei Xu , Wen xian Wang , Chi Zhang , Yan-Fang Guan , Xuefeng Xia , Ling Yang , Xin Yi

Organizations

The First Affiliated Hospital of Nanjing Medical University, Jiangsu Province, China, Geneplus-Beijing Institute, Changping District, Beijing, China, The 3rd Department of Gynecological Surgery, The Affiliated Tumor Hospital, Xinjiang Medical University Urumqi City, Xinjiang Autonomous Region, Urumqi, China, Inner Mongolia Autonomous Region People's Hospital, Hohhot, Inner Mongolia, Huhehaote, China, Department of Pathology, Fujian Medical University Cancer Hospital, Fuzhou, China, Department of Chemotherapy, Zhejiang Cancer Hospital, Hangzhou, Zhejiang, Hangzhou, China, Geneplus-Beijing Institute, Beijing, China, Geneplus-Beijing Institute, Xi'an Jiaotong University, Beijing, China, Houston Methodist Research Institute, Weill Cornell School of Medicine, Houston, TX, Geneplus-Beijing, Beijing, China

Research Funding

Other

Background: Somatic reversion mutations in either BRCA1/2 has been reported to lead to the resistance of platinum-based chemotherapy or PARPi. In this study we try to analyze the secondary somatic mutations in BRCA1/2 in patients with germline mutations. Methods: Using gene-panel target-captore next generation sequencing, we analyzed the secondary somatic mutations from 86 patients with BRCA1/2 germline mutations. Results: Eighty-six cases with BRCA1/2 gremline mutations were identified. Secondary somatic mutations restoring BRCA1/2 were identified in 7 patients, including 2 breast cancer, 3 ovarian cancer, 1 prostate cancer and 1cholangiocarcinoma patient. For these seven patients, five had been treated with platinum-based chemotherapy without PARPi and the other two (patient 1 and 2) with PARPi (olaparib). Patient 1 and 2 both received targeting therapy of PARP inhibitor olaparib after the germline BRCA1/2 mutation was detected. About six months later, plasma ctDNA was sequenced. Result showed that the germline mutations remained and additional larger deletions was detected. These secondary somatic mutations are not predicted to significantly affect the BRCA1/2 protein, and are likely to cause resistance to platinum-based chemotherapy or PARPi therapy by restoring BRCA1/2 ORF and DNA repair function. Conclusions: Secondary somatic mutations that restore BRCA1/2 in carcinomas with germline BRCA1/2 mutations predict resistance to platinum-based chemotherapy and PARP inhibitors, some strategies to reverse this type of drug resistance need further investigation.

PatientDiseaseGeneGermline MutationSecondary somatic mutations
1Breast cancerBRCA2c.176delC
(p.P59Qfs*21)
p.P59_N72delinsQTYLKLHKGNH
p.P59_P65del
2Ovarian cancerBRCA1c.3968_3971del
(p.Q1323Rfs*12)
p.A1308_M1324delinsGSFLDWFFQT
3cholangiocarcinomaBRCA2c.5645C > A
(p.S1882*)
p.S1882D
4Ovarian cancerBRCA1c.981_982delAT
(p.C328*fs*1)
p.S308_C328delinsQGANITDGLEVRKR
5Ovarian cancerBRCA1c.4801A > T
(p.K1601*)
p.K1601_V1602delinsFF
6Prostate cancerBRCA2c.5895delT
(p.H1966Ifs*38)
p.H1966_E2002delinsISQSHLQILVGFLAQQVENLSRYQMLHYKTQ
7Ovarian cancerBRCA1c.3704delA
(p.N1235Tfs*29)
p.N1215_V1234delinsS

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Abstract Details

Meeting

2019 ASCO Annual Meeting

Session Type

Poster Session

Session Title

Breast Cancer—Metastatic

Track

Breast Cancer

Sub Track

Other Breast Cancer Subtypes

Citation

J Clin Oncol 37, 2019 (suppl; abstr 1087)

DOI

10.1200/JCO.2019.37.15_suppl.1087

Abstract #

1087

Poster Bd #

168

Abstract Disclosures

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