Incidence of Neuregulin1 (NRG1) gene fusions across tumor types.

Authors

Stephen V. Liu

Stephen V. Liu

Georgetown University Medical Center, Washington, DC

Stephen V. Liu , Rebecca Feldman , Hossein Borghaei , Shirish M. Gadgeel , Patrick C. Ma , Jorge J. Nieva , Alexander I. Spira , Ari M. Vanderwalde , Antoinette J. Wozniak , Sushma Jonna , Edward S. Kim

Organizations

Georgetown University Medical Center, Washington, DC, Caris Life Sciences, Phoenix, AZ, Fox Chase Cancer Center, Philadelphia, PA, University of Michigan, Ann Arbor, MI, WVU Cancer Institute, West Virginia University, Morgantown, WV, University of Southern California, Los Angeles, CA, Virginia Cancer Specialists, Fairfax, VA, Division of Hematology/Oncology, The University of Tennessee Health Science Center, West Cancer Center, Germantown, TN, Barbara Ann Karmanos Cancer Institute, Detroit, MI, Georgetown University Medical Center, Washington, DC, US, Levine Cancer Institute, Atrium Health, Charlotte, NC

Research Funding

Pharmaceutical/Biotech Company

Background: NRG1 gene fusions are an emerging potential therapeutic target in non-small cell lung cancer (NSCLC). NRG1 is a ligand for the HER3 tyrosine kinase and NRG1 fusions can activate oncogenic HER2/HER3 and PI3K-AKT signaling. The pan-ErbB inhibitor afatinib has been associated with durable response in patients with NRG1+ lung adenocarcinoma. NRG1 fusions and the specific fusion partners have not been well characterized across different tumor types. Methods: Tumor samples submitted for profiling between 01/16 - 01/18 at a CLIA-certified genomics laboratory (Caris Life Sciences, Phoenix, AZ) were assayed with anchored multiplex PCR for targeted RNA sequencing with the ArcherDX fusion assay (Boulder, CO). Novel isoforms and fusions with high reads (defined as > 10% of total reads), high confidence after bioinformatics filtering and considered in-frame are included in this analysis. Results: In a cohort of 14,150 tumors successfully assayed, 31 cases (0.2%) harbored an NRG1 fusion. The incidence of NRG1 fusions varied by tumor type: 0.9% thyroid (1/116), 0.5% ovary (3/574), 0.5% cholangiocarcinoma (1/194), 0.4% pancreas(2/510), 0.3% NSCLC (20/5869), 0.2% breast (2/927), 0.2% sarcoma (1/475), and 1 case in sinonasal teratocarcinoma (SNTC). One of the 20 NSCLC cases (NRG1- SDC4) had squamous histology, the remaining were adenocarcinoma. No NRG1 fusions were detected in colorectal cancer (0/1382) or glioblastoma multiforme (0/1200). In NSCLC, NRG1 fusions were mutually exclusive with oncogenic alterations in EGFR, ALK, ROS1, RET, and KRAS with the exception of one case that co-occurred with a KRAS G12C mutation. Fusion partners are shown below. Conclusions: Gene fusions in NRG1 can be identified in various tumor types though the highest number of events was in NSCLC. Consistent detection of NRG1 fusions will need to account for multiple fusion partners. The optimal treatment of tumors harboring NRG1 fusions needs to be established.

Tumor TypeNRG1 fusion partners
NSCLCCD74 (n = 8), SDC4 (n = 3), ATPB1, DPYSL2, MRPL13, OAS2, PARP8, ROCK1, SLCA3, TNC, WRN (n = 1, each)
OvaryZMYM2, SETD4, TSHZ2 (n = 1, each)
PancreasCDH1, VTCN1 (n = 1, each)
BreastADAM9, COX10-AS1 (n = 1, each)
ThyroidTRAF3IP2
CholangiocarcinomaNOTCH2
SarcomaWHSC1L1
SNTCHMBOX1

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Abstract Details

Meeting

2018 ASCO Annual Meeting

Session Type

Poster Session

Session Title

Tumor Biology

Track

Tumor Biology

Sub Track

New Targets and New Technologies

Citation

J Clin Oncol 36, 2018 (suppl; abstr 12084)

DOI

10.1200/JCO.2018.36.15_suppl.12084

Abstract #

12084

Poster Bd #

197

Abstract Disclosures

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