Validation of a genomic risk classifier to predict prostate cancer-specific mortality (PCSM) in high-risk patients.

Authors

null

Jeffrey Karnes

Mayo Clinic, Rochester, MN

Jeffrey Karnes , Ashley Ross , Edward M. Schaeffer , Eric A. Klein , Nicholas Erho , Kasra Yousefi , Mandeep Takhar , Elai Davicioni , Bruce J. Trock

Organizations

Mayo Clinic, Rochester, MN, Johns Hopkins University School of Medicine, Baltimore, MD, Cleveland Clinic Glickman Urological and Kidney Institute, Cleveland, OH, GenomeDx Biosciences, Inc., Vancouver, BC, Canada, The Johns Hopkins University, Baltimore, MD

Research Funding

Pharmaceutical/Biotech Company

Background: The time course to PCSM is highly variable for men with high risk after prostatectomy (RP); a majority will die of other causes. Accurately stratifying PCSM risk can improve therapy decisions. We validated ability of the 22 gene Decipher genomic classifier (GC) to improve upon clinical variables to predict PCSM in men with high risk after RP. Methods: Men with adverse pathologic features (APF: pT3N0/N1, positive margins, or RP Gleason > 7) who underwent RP in 1988-2010 at Johns Hopkins, Cleveland Clinic, and Mayo Clinic (excluded men used to develop GC). Primary outcome: PCSM within 10 years of RP (PCSM10). We also analyzed men at very high PCSM risk: men with biochemical recurrence in < 2 years (BCR2), and men who developed metastasis after RP (MET). Logistic regression was used with GC dichotomized as < 0.6 (low-intermediate) vs. > 0.6 (high), adjusted for PSA, RP Gleason, and RP stage, or for CAPRA-S. AUC measured incremental improvement when adding GC to model of RP pathology. Results: 511 men (110 with PCSM10; 22%) had median follow-up 13.0 years. Risk of PCSM10 increased nearly 4-fold for high GC score (p < .0001), and increased AUC over RP pathology model from 0.767 to 0.804 (Table). GC score stratified PCSM10 risk from 11-46%. In men with BCR2 or MET, high GC increased PCSM10 risk 2-3 fold (p = .0007 or .005), with AUC of 0.743 and 0.671. GC similarly improved AUC when added to CAPRA-S. Conclusions: In the largest and longest followed sample to date, Decipher GC demonstrated clinically important prediction of PCSM at 10 years, independent of RP pathology features, in men at high risk due to APF, BCR2 or MET after RP.

ModelOdds ratio (95% CI)
All Men
n = 511
(110 PCSM10)
Men with
BCR2 n = 180
(84 PCSM10)
Men with MET
n = 226
(110 PCSM10)
Decipher GC > 0.6 vs. < 0.63.9 (2.3, 6.4)3.3 (1.6, 6.5)2.3 (1.3, 4.0)
PSA (ng/ml)1.0 (0.98, 1.02)1.00 (0.98, 1.02)1.00 (0.98, 1.02)
Stage
    Organ confinedRefRefRef
    EPE1.3 (0.6, 2.6)1.5 (0.6, 3.9)1.1 (0.5, 2.6)
    SVI2.0 (1.0, 4.2)2.2 (0.9, 5.5)1.1 (0.5, 2.4)
    LNI2.7 (1.2, 6.0)2.5 (0.9, 6.7)1.4 (0.6, 3.4)
RP Gleason score
    < 3+4RefRefRef
    4+31.9 (0.9, 3.9)1.3 (0.5, 3.3)0.9 (0.4, 2.0)
    8-105.0 (2.9, 8.6)3.1 (1.5, 6.4)2.3 (1.3, 4.4)
AUC baseline model0.7670.6930.633
    AUC baseline+GC0.8040.7430.671

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Abstract Details

Meeting

2016 ASCO Annual Meeting

Session Type

Poster Session

Session Title

Genitourinary (Prostate) Cancer

Track

Genitourinary Cancer—Prostate, Testicular, and Penile

Sub Track

Epidemiology/Outcomes

Citation

J Clin Oncol 34, 2016 (suppl; abstr 5056)

DOI

10.1200/JCO.2016.34.15_suppl.5056

Abstract #

5056

Poster Bd #

313

Abstract Disclosures