Genomic mutation profiling (GMP) and clinical outcome of patients treated with buparlisib (PI3K inhibitor) in the “Signature” program.

Authors

Sarina Piha-Paul

Sarina Anne Piha-Paul

Department of Investigational Cancer Therapeutics (Phase 1 Program), The University of Texas MD Anderson Cancer Center, Houston, TX

Sarina Anne Piha-Paul , James A. Knost , Fadi S. Braiteh , J. Thaddeus Beck , Daniel Lewis Spitz , Steven W. Papish , Beth A. Hellerstedt , Petros Nikolinakos , Matthew Hiram Taylor , Sant P. Chawla , Lee Steven Schwartzberg , David A. Smith , Sebastian Szpakowski , Lening Zhang , Theresa White , Claudia Lebedinsky

Organizations

Department of Investigational Cancer Therapeutics (Phase 1 Program), The University of Texas MD Anderson Cancer Center, Houston, TX, Illinois Cancer Care, Peoria, IL, Comprehensive Cancer Centers of Nevada, University of Nevada School of Medicine, Las Vegas, NV, Highlands Oncology Group, Fayetteville, AR, Palm Beach Cancer Inst, West Palm Beach, FL, Carol G Simon Cancer Ctr, Morristown, NJ, US Oncology Research, LLC, McKesson Specialty Health, and Texas Oncology, Central Austin Cancer Center, Austin, TX, Northeast Georgia Cancer Care, Athens, GA, Oregon Health and Science University, Portland, OR, Sarcoma Oncology Center, Santa Monica, CA, University of Tennessee Health Science Center, Memphis, TN, Compass Onc, Vancouver, WA, Novartis Institutes for BioMedical Research, East Hanover, NJ, Novartis Pharmaceuticals, East Hanover, NJ, Novartis Pharmaceuticals Corporation, East Hanover, NJ

Research Funding

Pharmaceutical/Biotech Company

Background: Pts included in the buparlisib (BKM120) module were analyzed by a tissue-agnostic genetic alteration–specific protocol that matches pts to treatments that target tumors harboring PI3K pathway–activated tumors. The pts are identified via standard of care physician-directed profiling. Methods: Pts with measurable advanced malignancies and no established standard therapy options were eligible. A local CLIA-certified test was sufficient for eligibility, and broad molecular profiling of pt tumors (confirmatory analysis of inclusion genetic alteration) was performed centrally post hoc. The primary objective was to assess clinical benefit (CB; CR + PR + SD at 16 weeks) by local investigator assessment. Buparlisib was given orally (100 mg once daily). Analysis correlating GMP with treatment outcomes will help determine the significance of these mutations. Results: GMP data were available for 76 pts across 19 tumor types (colorectal [14; 18%], sarcoma [11; 15%], ovarian [10; 13%], and head and neck [9; 12%]. Rare tumors included vaginal [1] and appendix [1]]. Median age: 60 years (range, 24-80), 49 women (65%), median number of prior therapies: 3 (range, 1-16). Baseline actionable alterations (local labs) included 38 PIK3CA mutations (50%), 17 PTEN mutations (22%), 16 PTEN losses (21%; IHC), 7 PIK3CA amplifications (9%), and 2 PIK3R1 mutations (3%). The concordance of baseline actionable alterations between local and central labs was 67%. Overall, 11 pts (15%) achieved CB. DNA from all pts was assayed by NGS, covering a panel of 288 cancer genes. Based on the assay, the tumors had a median of 4 mutations (range, 0-12) and tissue-specific patterns of mutation burden (lowest in cervix and sarcomas: 2; highest in colorectal and vaginal: 5+). The number of prior therapies did not correlate with the mutation load. Fewer mutations were noted in pts with CB. Most commonly altered genes (8+ pts): PIK3CA, PTEN, KRAS, TP53, APC, CDKN2A, RB1, and ERBB2. Aberrations in APC, BRCA2, CDKN2A, EP300, FBXW7, LRP1B, MLL2, PTEN, RB1, and SMAD4 were enriched in pts with no CB. Conclusions: Buparlisib showed activity in some pts, indicating that specific mutations may correlate with poor outcome. Clinical trial information: NCT01833169

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Abstract Details

Meeting

2015 ASCO Annual Meeting

Session Type

Poster Discussion Session

Session Title

Developmental Therapeutics—Clinical Pharmacology and Experimental Therapeutics

Track

Developmental Therapeutics and Translational Research

Sub Track

Cell Cycle and Checkpoints

Clinical Trial Registration Number

NCT01833169

Citation

J Clin Oncol 33, 2015 (suppl; abstr 2516)

DOI

10.1200/jco.2015.33.15_suppl.2516

Abstract #

2516

Poster Bd #

232

Abstract Disclosures

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