Prognostic and predictive significance of PAM50 intrinsic subtypes in the NCIC CTG MA.21 phase III chemotherapy trial.

Authors

null

Karen A. Gelmon

British Columbia Cancer Agency, Vancouver, BC, Canada

Karen A. Gelmon , Judy-Anne W. Chapman , Shuzhen Liu , Margot J. Burnell , Mark Norman Levine , Kathleen I. Pritchard , Timothy Joseph Whelan , Hope S. Rugo , Kathy S. Albain , Edith A. Perez , Shakeel Virk , Patti O'Brien , Lois E. Shepherd , Torsten O. Nielsen

Organizations

British Columbia Cancer Agency, Vancouver, BC, Canada, NCIC Clinical Trials Group, Queen's University, Kingston, ON, Canada, Vancouver Coastal Health Research Institute and University of British Columbia, Vancouver, BC, Canada, Saint John Regional Hospital, Saint John, NB, Canada, Ontario Clinical Oncology Group, McMaster University, Hamilton, ON, Canada, Sunnybrook Odette Cancer Centre and the University of Toronto, Toronto, ON, Canada, Juravinski Cancer Centre, Hamilton, ON, Canada, University of California San Francisco Comprehensive Cancer Center, San Francisco, CA, Loyola University Medical Center, Maywood, IL, Mayo Clinic, Jacksonville, FL, NCIC Clinical Trials Group, Kingston, ON, Canada, NCIC, Kingson, ON, Canada

Research Funding

Other

Background: Breast cancer intrinsic subtypes defined by the 50-gene PAM50 test were reported to be prognostic and predictive in endocrine therapy trials. MA21 randomized 2,104 patients to receive dose intense cyclophosphamide, epirubicin and flurouracil (CEF); dose dense, dose intense epirubicin, cyclophosphamide and paclitaxel (EC/T); or 3-weekly doxorubicin, cyclophosphamide and paclitaxel (AC/T). We previously reported that AC/T had reduced relapse free survival (RFS) compared to both CEF and EC/T. Here, we investigated the prognostic and predictive (taxane versus not) significance of PAM50 in MA.21. Methods: Patients were ≤60 years old with node-positive or high-risk node-negative breast cancer. Median follow-up was 8 years. Intrinsic subtypes (luminal A, luminal B, basal-like, HER2E) were determined with FFPE extracted total RNA by Nanostring PAM50. Univariate assessment was with a stratified log-rank test. Effects of intrinsic subtypes and baseline patient characteristics on relapse-free survival (RFS) were investigated with stratified step-wise Cox multivariate regression, adding a factor if p<0.05. Results: The 1,094 cases completing PAM50 intrinsic subtyping were not significantly (p<0.05) different compared to those who did not in terms of treatment and stratification factors. 27% were classified as luminal A; 23% luminal B; 32% basal-like; and 18% HER2E. Intrinsic subtypes had a significant (p<0.001) univariate association with RFS. In multivariate analyses, intrinsic subtype had a significant prognostic effect on RFS (p= 0.001). Compared with luminal A, the hazard ratios (HR) were: luminal B =1.47 (95% CI = 0.93-2.30, p=0.10); basal-like= 1.95 (CI = 1.10-3.47, p=0.02); and HER2E = 2.66 (95% CI = 1.63-4.34, p<0.001). The interaction term between intrinsic subtype and treatment was not significant (p>0.05). Conclusions: Intrinsic subtype defined by the Nanostring PAM50 test had a significant prognostic effect on RFS for breast cancer patients treated with CEF, EC/T and AC/T. Subtype was not predictive of outcome amongst these chemotherapy regimens. Clinical trial information: NCT00014222.

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Abstract Details

Meeting

2014 ASCO Annual Meeting

Session Type

Poster Highlights Session

Session Title

Tumor Biology

Track

Tumor Biology

Sub Track

Molecular Diagnostics and Imaging

Clinical Trial Registration Number

NCT00014222

Citation

J Clin Oncol 32:5s, 2014 (suppl; abstr 11019)

DOI

10.1200/jco.2014.32.15_suppl.11019

Abstract #

11019

Poster Bd #

8

Abstract Disclosures